PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_013112-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 505aa    MW: 53148.9 Da    PI: 6.5098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_013112-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.3e-12310355555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  NNU_013112-RA 310 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 355
                    99***********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-17303365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.39305354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-16307364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.71E-13309359No hitNo description
PfamPF000103.6E-9310355IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-13311360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MQPCSGEMQG MDSIPQMGLQ ELQNGQHQMP NQHHIHQGSH FDHSSHDDFL EQMLSNLPWT  60
ENLSGNPKSP WDLNPQNPNG NPTPNNNTAT SATATNQKLF NIPIATSNGK PGDLSDDQQT  120
SSQPENLQYG FDDSTLLASR LRQNQISGNS LAAKTLALQQ QLLLSRGGVG MAISPSSVPG  180
TSSQGGESGL RPLPLSLASA DSSDSRLLVD RSRDGVVDAS FKSPSPNGEA SVQGLYNGFA  240
GSLSRTAQTA DQQHFHNPQV ATMPAQNFSA PATTGINQAA LAAGAAGGVG AAPQRQQRVR  300
ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY VKFLQLQVKV  360
LSMSRLGGAA AVAPLVADIS SDGGGDCVQA SGGRSANGAQ TASSNDSLTA TEQQVAKLME  420
EDMGSAMQYL QGKGLCLMPI SLATAISTAT TCHSRNPNHT HHRLVSPNVD VPQSPSMSVL  480
TVQSVTMGNG GGEASVKDAT SISKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314319RLRRER
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265624.10.0PREDICTED: transcription factor bHLH66-like
SwissprotQ9ZUG93e-88BH066_ARATH; Transcription factor bHLH66
TrEMBLF6HYI30.0F6HYI3_VITVI; Putative uncharacterized protein
STRINGVIT_11s0037g00040.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.15e-50LJRHL1-like 1